New Mpox Strain Is Changing Fast; African Scientists Are ‘Working Blind’ to Respond 

Dr. Robert Musole, medical director of the Kavumu hospital (R) consults an infant suffering from a severe form of mpox at the Kavumu hospital, 30 km north of Bukavu in eastern Democratic Republic of Congo, August 24, 2024. (AFP)
Dr. Robert Musole, medical director of the Kavumu hospital (R) consults an infant suffering from a severe form of mpox at the Kavumu hospital, 30 km north of Bukavu in eastern Democratic Republic of Congo, August 24, 2024. (AFP)
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New Mpox Strain Is Changing Fast; African Scientists Are ‘Working Blind’ to Respond 

Dr. Robert Musole, medical director of the Kavumu hospital (R) consults an infant suffering from a severe form of mpox at the Kavumu hospital, 30 km north of Bukavu in eastern Democratic Republic of Congo, August 24, 2024. (AFP)
Dr. Robert Musole, medical director of the Kavumu hospital (R) consults an infant suffering from a severe form of mpox at the Kavumu hospital, 30 km north of Bukavu in eastern Democratic Republic of Congo, August 24, 2024. (AFP)

Scientists studying the new mpox strain that has spread out of Democratic Republic of Congo say the virus is changing faster than expected, and often in areas where experts lack the funding and equipment to properly track it.

That means there are numerous unknowns about the virus itself, its severity and how it is transmitting, complicating the response, half a dozen scientists in Africa, Europe and the United States told Reuters.

Mpox, formerly known as monkeypox, has been a public health problem in parts of Africa since 1970, but received little global attention until it surged internationally in 2022, prompting the World Health Organization to declare a global health emergency. That declaration ended 10 months later.

A new strain of the virus, known as clade Ib, has the world's attention again after the WHO declared a new health emergency.

The strain is a mutated version of clade I, a form of mpox spread by contact with infected animals that has been endemic in Congo for decades. Mpox typically causes flu-like symptoms and pus-filled lesions and can kill.

Congo has had more than 18,000 suspected clade I and clade Ib mpox cases and 615 deaths this year, according to the WHO. There have also been 222 confirmed clade Ib cases in four African countries in the last month, plus a case each in Sweden and Thailand in people with a travel history in Africa.

"I worry that in Africa, we are working blindly," said Dr. Dimie Ogoina, an infectious diseases expert at Niger Delta University Hospital in Nigeria who chairs the WHO's mpox emergency committee. He first raised the alarm about potential sexual transmission of mpox in 2017, now an accepted route of spread for the virus.

"We don’t understand our outbreak very well, and if we don't understand our outbreak very well, we will have difficulty addressing the problem in terms of transmission dynamics, the severity of the disease, risk factors of the disease," Ogoina said. "And I worry about the fact that the virus seems to be mutating and producing new strains."

He said it took clade IIb in Nigeria five years or more to evolve enough for sustained spread among humans, sparking the 2022 global outbreak. Clade Ib has done the same thing in less than a year.

MUTATING 'MORE RAPIDLY'

Mpox is an orthopoxvirus, from the family that causes smallpox. Population-wide protection from a global smallpox vaccine campaign 50 years ago has waned, as the vaccinating stopped when the disease was eradicated.

Genetic sequencing of clade Ib infections, which the WHO estimates emerged mid-September 2023, show they carry a mutation known as APOBEC3, a signature of adaptation in humans.

The virus that causes mpox has typically been fairly stable and slow to mutate, but APOBEC-driven mutations can accelerate viral evolution, said Dr. Miguel Paredes, who is studying the evolution of mpox and other viruses at Fred Hutchison Cancer Center in Seattle.

"All the human-to-human cases of mpox have this APOBEC signature of mutations, which means that it's mutating a little bit more rapidly than we would expect," he said.

Paredes and other scientists said a response was complicated by several mpox outbreaks happening at once.

In the past, mpox was predominantly acquired through human contact with infected animals. That is still driving a rise in Congo in clade I cases – also known as clade Ia - likely due in part to deforestation and increased consumption of bushmeat, scientists said.

The mutated versions, clade Ib and IIb, can now essentially be considered a sexually transmitted disease, said Dr. Salim Abdool Karim, a South African epidemiologist and chair of the Africa CDC’s mpox advisory committee. Most of the mutated clade Ib cases are among adults, driven at first by an epidemic among female sex workers in South Kivu, Congo.

The virus also can spread through close contact with an infected person, which is likely how clusters of children have been infected with clade Ib, particularly in Burundi and in eastern Congo’s displacement camps, where crowded living conditions may be contributing.

Children, pregnant women and people with weakened immune systems or other illnesses may be at greater risk of serious mpox disease and death, say the WHO and mpox scientists.

Clade I has typically caused more severe disease, with fatality rates of 4%-11%, compared to around 1% for clade II. Ogoina said data from Congo suggests few have died of the new Ib version, but he feared some data is being mixed up.

More research is urgently needed, but three teams tracking mpox outbreaks in Africa say they cannot even access chemicals needed for diagnostic tests. Clade Ib can also be missed by some diagnostic tests.

Planning a response, including vaccination strategies, without this is difficult, the scientists said.

Karim said around half of cases in eastern Congo, where Ib is particularly prevalent, are only being diagnosed by doctors, with no laboratory confirmation.

Getting samples to labs is difficult because the healthcare system is already under pressure, he said. And around 750,000 people have been displaced amid fighting between the M23 rebel group and the government.

Many African laboratories cannot get the supplies they need, said Dr. Emmanuel Nakoune, an mpox expert at the Institut Pasteur in Bangui, Central African Republic, which also has clade Ia cases.

"This is not a luxury," he said, but necessary to track deadly outbreaks.



Sudan Families Bury Loved Ones Twice as War Reshapes Khartoum

A Red Crescent team exhumes bodies from a mass grave in Khartoum. (Asharq Al-Awsat)
A Red Crescent team exhumes bodies from a mass grave in Khartoum. (Asharq Al-Awsat)
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Sudan Families Bury Loved Ones Twice as War Reshapes Khartoum

A Red Crescent team exhumes bodies from a mass grave in Khartoum. (Asharq Al-Awsat)
A Red Crescent team exhumes bodies from a mass grave in Khartoum. (Asharq Al-Awsat)

Under a punishing mid‑morning sun, Souad Abdallah cradles her infant and stares at a freshly opened pit in al‑Baraka square on the eastern fringe of Sudan’s capital.

Moments earlier the hole had served as the hurried grave of her husband – one of hundreds of people buried in playgrounds, traffic islands and vacant lots during Sudan’s two‑year war.

Seven months ago, Abdallah could not risk the sniper fire and checkpoints that ringed Khartoum’s official cemeteries. Today she is handed her husband’s remains in a numbered white body‑bag so he can receive the dignity of a proper burial.

She is not alone. Families gather at the square, pointing out makeshift graves – “my brother lies here... my mother there” – before forensic teams lift 118 bodies and load them onto flat‑bed trucks known locally as dafaar.

The Sudanese war erupted on 15 April 2023 when the paramilitary Rapid Support Forces (RSF) and the army clashed for control of Khartoum, quickly spreading to its suburbs, notably Omdurman. More than 500 civilians died in the first days and thousands more have been killed since, although no official tally exists.

The army recaptured the capital on 20 May 2025, but the harder task, officials say, is re‑burying thousands of bodies scattered in mass graves, streets and public squares.

“For the next 40 days we expect to move about 7,000 bodies from across Khartoum to public cemeteries,” Dr. Hisham Zein al‑Abideen, the city’s chief forensic pathologist, told Asharq Al-Awsat. He said his teams, working with the Sudanese Red Crescent, have already exhumed and re-interred some 3,500 bodies and located more than 40 mass graves.

One newly discovered site at the International University of Africa in southern Khartoum contains about 7,000 RSF fighters spread over a square‑kilometer area, he added.

Abdallah, a mother of three, recalled to Asharq Al-Awsat how a stray bullet pierced her bedroom window and killed her husband. “We buried him at night, without witnesses and without a wake,” she said. “Today I am saying goodbye again this time with honor.”

Nearby, Khadija Zakaria wept as workers unearthed her sister. “She died of natural causes, but we were barred from the cemetery, so we buried her here,” she said. Her niece and brother‑in‑law were laid in other improvised graves and are also awaiting transfer.

Exhumations can be grim. After finishing at al‑Baraka, the team drives to al‑Fayhaa district, where the returning owner of an abandoned house has reported a desiccated corpse in his living room. Neighbors said it is a Rapid Support Forces (RSF) fighter shot by comrades. In another case, a body is pulled from an irrigation canal and taken straight to a cemetery.

Social media rumors that authorities demand hefty fees for re‑burials are untrue, Dr. Zein al‑Abideen stressed. “Transporting the remains is free. It is completely our responsibility,” he added. The forensic crews rotate in two shifts to cope with the fierce heat.

Asked how they cope with the daily horror, one member smiled wanly over a cup of tea, saying: “We are human. We try to find solutions amid the tragedy. If it were up to us, no family would have to mourn twice.”

Khartoum today is burying bodies – and memories. “We are laying our dead to rest and, with them, part of the pain,” Abdallah said as she left the square, her child asleep on her shoulder. “I buried my husband twice, but we have not forgotten him for a single day. Perhaps now he can finally rest in peace.”