ISIS and Al-Qaeda Wage ‘Small’ Wars on Margins of Civil Strife

US-backed Syrian Democratic Forces fighters stand guard next to men waiting to be screened after being evacuated out of the last territory held by ISIS, near Baghouz, eastern Syria, Feb. 22, 2019. (AP)
US-backed Syrian Democratic Forces fighters stand guard next to men waiting to be screened after being evacuated out of the last territory held by ISIS, near Baghouz, eastern Syria, Feb. 22, 2019. (AP)
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ISIS and Al-Qaeda Wage ‘Small’ Wars on Margins of Civil Strife

US-backed Syrian Democratic Forces fighters stand guard next to men waiting to be screened after being evacuated out of the last territory held by ISIS, near Baghouz, eastern Syria, Feb. 22, 2019. (AP)
US-backed Syrian Democratic Forces fighters stand guard next to men waiting to be screened after being evacuated out of the last territory held by ISIS, near Baghouz, eastern Syria, Feb. 22, 2019. (AP)

Civil wars and strife often witness smaller wars and conflict between parties fighting in the same camp. This took place, for example, between Christian parties during the 1975-90 Lebanese civil when the Kataeb and National Liberal Party waged bloody battles for dominance. They culminated in the defeat of the Tigers Militia – the armed wing of the NLP – and establishment of the Lebanese Forces.

In Afghanistan, Mujahideen factions fought against the communist rule in Kabul and its Russian supporters. No sooner had the Mujahideen claimed victory that they turned against each other in 1992, turning Kabul into rubble. Their war only ended with the rise of the Taliban, which swallowed or nearly swallowed them up whole.

In Algeria, the 1990s saw the emergence of dozens of armed groups that fought against the rulers in order to oust and replace them with an “Islamic government.” They were battling the Algerian army, while the factions were also fighting each other in order to “unite their banner.” The infighting helped the Algerian security forces to turn the tide in their favor and defeat all of the armed groups.

The above introduction leads to the question: What sort of relationship is in store in the future between the rival ISIS and al-Qaeda organizations?

Both organizations follow the same ideology even though ISIS was formed years after al-Qaeda.

ISIS is the product of the 2003 US invasion of Iraq. Al-Qaeda, meanwhile, was born in the late 1980s in Afghanistan during a time of resistance against the Red Army and communists. In the 1990s, the Egyptian al-Jihad organization merged with al-Qaeda, leading to the establishment of the so-called Qaidat al-Jihad group, which was predominantly comprised of Egyptian members.

The rift between ISIS and al-Qaeda happened after the eruption of the Syrian civil conflict in 2011. At the time, al-Qaeda in Iraq was known as the Islamic State in Iraq. The rift was the culmination of clashes between al-Qaeda’s Iraqi branch, led by Jordan’s Abu Musab al-Zarqawi, and several Sunni factions that were fighting the American “occupiers”. These factions refused the dictates of Zarqawi, who wanted to impose the authority of his organization over all Iraqi factions.

Zarqawi’s actions prompted several Sunni groups to work with the Americans and Iraqi government instead of joining an organization that was leading the country towards sectarian civil war. The Sunni resistance, or Sahwat as they would later be known, defeated al-Qaeda, forcing it to retreat from the confrontation. Command was given to Iraqi members, while the non-Iraqis took a backseat.

Zarqawi died in 2006. He was succeeded by Abu al-Hassan al-Muhajir (Abu Ayyoub al-Masri), another foreign leader of al-Qaeda. The organization was at the time, however, identified as Iraqi and operating under the name the Islamic State in Iraq, led by Abu Omar al-Baghdadi. He would be succeeded after his killing by Abu Bakr al-Baghdadi.

When the Syrian conflict erupted from peaceful protests against the regime of president Bashar Assad in 2011, Abu Bakr al-Baghdadi was quick to dispatch Syrian Abu Mohammad al-Julani to the country. Al-Julani was a leading member of al-Qaeda and worked for al-Baghdadi as part of the Islamic State in Iraq. In Syria, he was tasked with organizing an armed movement to act against the regime.

The Syrian conflict led to the fallout between al-Baghdadi and al-Julani. Al-Baghdadi wanted al-Julani to operate under his command in Syria. In 2013, the Islamic State in Iraq transformed to become the Islamic State of Iraq and the Levant after Syrian regime forces withdrew from the border with Iraq. Al-Baghdadi then declared that the Sykes–Picot border between the neighboring countries was no more.

Al-Julani, however, rebelled against his Iraqi leader, say the latter’s supporters. Al-Baghdadi’s supports showed no mercy to their adversaries, whether they were Iraqi or Syrian government soldiers, or civilians who were viewed as apostates or infidels, or even fighters from other Islamic organizations that did not swear allegiance to the “State”.

The al-Qaeda leadership tried to avert confrontation with al-Baghdadi. It sent some of its most prominent leaders to Syria to resolve the dispute or strengthen al-Julani should efforts fail to end the rift.

The Iraqi leader, however, did not forgive the Syrian for “betraying the cause.” Al-Baghdadi believed that al-Julani turned against him when he was transferred to Syria, where he formed the al-Nusra Front as an independent branch of al-Qaeda. This branch would answer directly to the al-Qaeda command based on the Afghanistan-Pakistan border, not the Iraqi leadership.

On the ground, ISIS swallowed the Syrian al-Qaeda branch whole. Its sweep of Syria was only stopped with the beginning of the operations of the US-led international coalition against al-Baghdadi’s organization in September 2014. This allowed al-Julani to catch his breath and rebuild the al-Nusra Front. Its operations became limited to northwestern Syria, the only region where al-Baghdadi’s fighters could not expand.

Al-Julani also waged small “civil” wars against extremist Islamic groups active in areas under his control. He succeeded through force and sometimes through dialogue to eliminate the majority of armed groups that were fighting independently against the regime. The groups that managed to escape began to work directly under the Turkish army and its intelligence after their forces secured vast areas of northwestern Syria (Idlib and Latakia), its north (Aleppo) and northeast (al-Raqqa).

ISIS was defeated militarily in Syria in spring 2019 and al-Baghdadi died in a US raid in the Idlib countryside later that year. ISIS retains a few cells that are trying to regroup under the command of their new leader Abu Ibrahim al‑Hashimi al‑Qurashi, but they are still weak and do not pose a serious threat to adversaries, whether in the Syrian regime or Hayat Tahrir al-Sham, which was established as a “successor” of the al-Nusra Front.

The ISIS collapse in Syria did not spell the end of clashes between the group and al-Qaeda. ISIS affiliates across the globe have pledged allegiance to their new leader and are active in combating “infidels and apostates” in various countries, such as Yemen, Somalia and Afghanistan, and the African Sahel. ISIS media boasts of these clashes and often reports on fighting between its members and al-Qaeda in the Sahel region.

There is no doubt that these small “civil wars” between ISIS and al-Qaeda may expand or become contained. The weakness of both organizations is the factor that will determine which way the fighting will go. The weakness does not allow them to wage a largescale confrontation that would end in the victory of one over the other and the “unification of banners”. The Armed Islamic Group of Algeria tried to do this in the 1990s and failed.

Another factor is that the balance of power does not favor one party over the other as it did in the past. Under al-Baghdadi, ISIS used to boast that it was ruling a “state” due to its control over large swathes of Syria and Iraq. This is no longer the case. Al-Qaeda, meanwhile, is now no more than an armed group that does not control a “state” or even an “emirate”. It is now at the command of the “owners of the land,” such as the Taliban in Afghanistan.

Both organizations appear at an impasse, meaning the competition between them and their terrorist attacks around the globe will continue for years to come, unless their leaders agree to unite forces.



Russia Skirts Western Sanctions to Ramp up Its Military Footprint in Africa 

This satellite image provided by Planet Labs PBC shows trucks lined up on a dock as the Russian-flagged cargo ship, Siyanie Severa, unloads its cargo, May 29, 2025, in Bata, Equatorial Guinea. (Planet Labs PBC via AP)
This satellite image provided by Planet Labs PBC shows trucks lined up on a dock as the Russian-flagged cargo ship, Siyanie Severa, unloads its cargo, May 29, 2025, in Bata, Equatorial Guinea. (Planet Labs PBC via AP)
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Russia Skirts Western Sanctions to Ramp up Its Military Footprint in Africa 

This satellite image provided by Planet Labs PBC shows trucks lined up on a dock as the Russian-flagged cargo ship, Siyanie Severa, unloads its cargo, May 29, 2025, in Bata, Equatorial Guinea. (Planet Labs PBC via AP)
This satellite image provided by Planet Labs PBC shows trucks lined up on a dock as the Russian-flagged cargo ship, Siyanie Severa, unloads its cargo, May 29, 2025, in Bata, Equatorial Guinea. (Planet Labs PBC via AP)

Even as it pounds Ukraine, Russia is expanding its military footprint in Africa, delivering sophisticated weaponry to sub-Saharan conflict zones where a Kremlin-controlled armed force is on the rise. Skirting sanctions imposed by Western nations, Moscow is using cargo ships to send tanks, armored vehicles, artillery and other high-value equipment to West Africa, The Associated Press has found.

Relying on satellite imagery and radio signals, AP tracked a convoy of Russian-flagged cargo ships as they made a nearly one-month journey from the Baltic Sea. The ships carried howitzers, radio jamming equipment and other military hardware, according to military officials in Europe who closely monitored them. The deliveries could strengthen Russia’s fledgling Africa Corps as Moscow competes with the United States, Europe and China for greater influence across the continent.

The two-year-old Africa Corps, which has links to a covert branch of Russia’s army, is ascendant at a time when US and European troops have been withdrawing from the region, forced out by sub-Saharan nations turning to Russia for security.

Mali, Burkina Faso and Niger have been battling fighters linked with al-Qaeda and the ISIS group for more than a decade.

At first, mercenary groups with an arms-length relationship to the Kremlin entered the fray in Africa. But increasingly, Russia is deploying its military might, and intelligence services, more directly.

"We intend to expand our cooperation with African countries in all spheres, with an emphasis on economic cooperation and investments," Kremlin spokesman Dmitry Peskov said. "This cooperation includes sensitive areas linked to defense and security."

From the ports, Russian weapons are trucked to Mali Russia's 8,800-ton Baltic Leader and 5,800-ton Patria are among hundreds of ships that Western nations have sanctioned to choke off resources for Russia's war in Ukraine. The ships docked and unloaded in Conakry, Guinea, in late May, AP satellite images showed.

Other ships made deliveries to the same port in January. They delivered tanks, armored vehicles and other hardware that was then trucked overland to neighboring Mali, according to European military officials and a Malian blogger's video of the long convoy.

The military officials spoke to AP about Russian operations on condition of anonymity. The AP verified the blogger's video, geolocating it to the RN5 highway leading into Bamako, the Malian capital.

After the latest delivery in Conakry, trucks carrying Russian-made armored vehicles, howitzers and other equipment were again spotted on the overland route to Mali.

Malian broadcaster ORTM confirmed that the West African nation's army took delivery of new military equipment. AP analysis of its video and images filmed by the Malian blogger in the same spot as the January delivery identified a broad array of Russian-made hardware, including 152 mm artillery guns and other smaller canons.

AP also identified a wheeled, BTR-80 armored troop carrier with radio-jamming equipment, as well as Spartak armored vehicles and other armored carriers, some mounted with guns. The shipment also included at least two semi-inflatable small boats, one with a Russian flag painted on its hull, as well as tanker trucks, some marked "inflammable" in Russian on their sides.

The military officials who spoke to AP said they believe Russia has earmarked the most potent equipment — notably the artillery and jamming equipment — for its Africa Corps, not Malian armed forces. Africa Corps appears to have been given air power, too, with satellites spotting at least one Su-24 fighter-bomber at a Bamako air base in recent months.

Moscow's notorious secret unit

For years, French forces supported counterinsurgency operations in Mali and neighboring Burkina Faso and Niger. But France pulled out its troops after coups in Mali in 2020 and 2021, in Burkina Faso in 2022 and Niger in 2023. Russian mercenaries stepped into the vacuum.

Wagner Group, the most notable, deployed to Sudan in 2017 and expanded to other African countries, often in exchange for mining concessions.

It earned a reputation for brutality, accused by Western countries and UN experts of human rights abuses, including in Central African Republic, Libya and Mali.

Of 33 African countries in which Russian military contractors were active, the majority were Wagner-controlled, according to US government-sponsored research by RAND.

But after Wagner forces mutinied in Russia in 2023 and their leader, Yevgeny Prigozhin, was killed two months later in a suspicious plane crash, Moscow tightened its grip. Russian military operations in Africa were restructured, with the Kremlin taking greater control through Africa Corps.

It is overseen by the commander of Unit 29155, one of the most notorious branches of Russia’s shadowy GRU military intelligence service, according to the European Union. Unit 29155 has been accused of covertly attacking Western interests for years, including through sabotage and assassination attempts.

The EU in December targeted Unit 29155 Maj. Gen. Andrey Averyanov with sanctions, alleging that he is in charge of Africa Corps operations.

"In many African countries, Russian forces provide security to military juntas that have overthrown legitimate democratic governments, gravely worsening the stability, security and democracy of the countries," the EU sanctions ruling said. These operations are financed by exploiting the continent's natural resources, the ruling added.

The Russian Ministry of Defense didn’t immediately respond to questions about Averyanov’s role in Africa Corps.

Africa Corps recruitment

Researchers and military officials say the flow of weapons from Russia appears to be speeding Africa Corps’ ascendancy over Wagner, helping it win over mercenaries that have remained loyal to the group. Africa Corps is also recruiting in Russia, offering payments of up to 2.1 million rubles ($26,500), and even plots of land, for signing a contract with the Ministry of Defense, plus more on deployment.

Within days of the latest equipment delivery, Wagner announced its withdrawal from Mali, declaring "mission accomplished" in a Telegram post.

Africa Corps said in a separate post that it would remain.

The changeover from Wagner to Africa Corps in Mali could be a forerunner for other similar transitions elsewhere on the continent, said Julia Stanyard, a researcher of Russian mercenary activity in Africa.

"Bringing in this sort of brand-new sophisticated weaponry, and new armored vehicles and that sort of thing, is quite a bit of a shift," said Stanyard, of the Switzerland-based Global Initiative Against Transnational Organized Crime.

Armed groups in Mali have inflicted heavy losses on Malian troops and Russian mercenaries. The al-Qaeda linked group JNIM killed dozens of soldiers in an attack this month on a military base. Insurgents also killed dozens of Wagner mercenaries in northern Mali last July.