Scientists Make First Complete Genome of Desert Locust

A farmer holds up handful of locusts that descended on a field in Byblos, north of Beirut, November 2, 2004. REUTERS/Sharif Karim
A farmer holds up handful of locusts that descended on a field in Byblos, north of Beirut, November 2, 2004. REUTERS/Sharif Karim
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Scientists Make First Complete Genome of Desert Locust

A farmer holds up handful of locusts that descended on a field in Byblos, north of Beirut, November 2, 2004. REUTERS/Sharif Karim
A farmer holds up handful of locusts that descended on a field in Byblos, north of Beirut, November 2, 2004. REUTERS/Sharif Karim

The first high-quality genome of the desert locust -- the most destructive migratory insect in the world -- has been produced by US Department of Agriculture Research Service scientists.

Genome is a set of genetic information stored in the DNA or RNA. Producing a genome requires samples with specific characteristics.

That locust was provided by chemical ecologist Baldwyn Torto with the International Center of Insect Physiology and Ecology (ICIPE) in Nairobi, Kenya. He and his team tracked down swarms of locusts, collecting specimens across Kenya until he had two parents that he was able to breed to produce an offspring of known pedigree.

The scientists were able to go from sample collection to a final assembled genome in under 5 months. The desert locust is one of the largest insect genomes ever completed and it was all done from a single locust.

The genome of the desert locust is nearly three times the size of the human genome, explains entomologist Scott Geib with the ARS Tropical Crop and Commodity Protection Research Unit in Hawaii, and one of the team leaders. “We were concerned that, faced with this huge and very likely complex desert locust genome, it was going to be an extremely long and difficult job. However, we were able to go from sample collection to a final assembled genome in under 5 months,” he notes.

ARS has made the genome available to the international research community through the National Center for Biotechnology Information, to help fight this dangerous pest.

Desert locust plagues are cyclic and have been recorded since the times of the Pharaohs in ancient Egypt, as far back as 3200 B.C. They caused devastation in East Africa, the Middle East, and Southwest Asia in the 2020-2022 season, threatening food security in many countries.

A small swarm can eat as much food in a day as would feed 35,000 people, according to the Food and Agriculture Organization of the United Nations.

Current desert locust control mostly depends on locating swarms and spraying them with broad-spectrum pesticides. Ultimately, this genomics work could decrease dependence on such pesticides, using other measures that could be figured out after the determination of the genome, explains Scott Geib.



As Baboons Become Bolder, Cape Town Battles for Solutions

A group of baboons move through the main shopping street of Simon's Town outside of Cape Town on October 31, 2024. (AFP)
A group of baboons move through the main shopping street of Simon's Town outside of Cape Town on October 31, 2024. (AFP)
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As Baboons Become Bolder, Cape Town Battles for Solutions

A group of baboons move through the main shopping street of Simon's Town outside of Cape Town on October 31, 2024. (AFP)
A group of baboons move through the main shopping street of Simon's Town outside of Cape Town on October 31, 2024. (AFP)

On a sunny afternoon in Cape Town's seaside village of Simon's Town, three young chacma baboons cause a commotion, clambering on roofs, jumping between buildings and swinging on the gutters.

Enchanted tourists stop to photograph the troop crossing the road. Locals are less impressed: it's a daily scene in the charming village nestled between the Atlantic Ocean and Table Mountain National Park.

About 500 chacma baboons -- among the largest monkey species and weighing up to 40 kilos (88 pounds) -- roam the peninsula south of Cape Town, says the South African National Biodiversity Institute.

And as human development pushes up the mountain into their natural habitat, the animals are increasingly entering plush properties to forage in gardens and take the pickings from the bins. Some manage to sneak into houses where they can wreak havoc.

Many locals are fond of the creatures, giving them pet names and following their daily adventures on social media.

But others are increasingly frustrated.

"They've become so bold now. They're more domesticated than they should be," said Duncan Low, 60, who runs an ice cream shop.

The intruders have even started raiding kitchens and grabbing food from plates in restaurants. "They're on a sugar and fast-food rush," Low said.

In 2021, the city put down a notorious alpha-male monkey who had terrorized residents with more than 40 raids for food in rubbish bins, from lawns and porches, sometimes entering homes while people were inside.

- Monkey management -

Tension between humans and baboons is "the highest it's ever been", said ecologist Justin O'Riain, who directs the Institute for Communities and Wildlife in Africa at the University of Cape Town.

A baboon on the edge of a wild and an urban area is "the most difficult animal in the world to manage", O'Riain said.

"They are strong, they can climb... and they can learn from each other: there's no landscape that they can't conquer."

As human settlement of the Cape has expanded, the baboons have been "pushed higher and higher up the mountain" where foraging conditions are harder, O'Riain added.

The lush gardens that people have built, with fruit trees and swimming pools, are tempting attractions.

The City of Cape Town, in partnership with park authorities, has for years run a program to manage the marauding monkeys that relies on teams of baboon monitors.

They employ a primarily non-lethal approach, O'Riain said.

However, some techniques, such as firing paintball guns to keep troops away or culling a particularly problematic animal, have come under fire.

Amid an increasingly emotional outcry, vociferous campaigner Baboon Matters announced court action against the city and parks authorities in May for failing to implement what it considers more acceptable control measures, such as baboon-proof fencing and bins.

Facing criticism and funding limits, the authorities said the baboon management program would be wound down by the end of the year as they investigate other "more sustainable urban solutions".

It will however remain in place through December -- a particularly busy month for tourists -- but with fewer rangers, it said.

"We're going to lose our first line of defense," O'Riain said, with more baboons already entering urban areas often at risk to their lives.

- Deaths highest in 10 years -

Thirty-three baboons were known to have died between July 2023 and June 2024, the highest number in 10 years, city authorities say.

Nearly half the deaths were caused by human factors, including shooting with pellet guns, collisions with vehicles and dog attacks.

Coexistence with baboons should come with "a degree of human compliance", starting with managing food waste, conservation activist Lynda Silk, head of the Cape Peninsula Civil Conservation group, said.

"We don't need to be in competition with our natural resources: there can be ways that we can manage our lifestyles to minimize the negative impacts," she said.

For O'Riain, the only viable solution to the baboon battle is to erect fencing in certain areas that is made up of electric wiring and underground mesh to prevent the animals from digging underneath.

A prototype installed 11 years ago had shown great success, with almost no animals entering the area, he said. A 2023 report already suggested where the fencing should be placed.

"Baboons can come and forage right up to the edge of the fence and no one will disturb them," said O'Riain.

"It's a completely peaceful interaction, a win-win for people and for baboons."